Converting from ped format to Haplin format
For the convenience of the user, Haplin can convert from the "standard"
ped data format to the Haplin data format.
The supplied function pedToHaplin
does the conversion. As an example, here's an input fil in the ped
format:
test_pedToHaplin.ped
A conversion is done with the command
pedToHaplin("test_pedToHaplin.ped",
outdata = "test_pedToHaplin_result.txt", colnames.out = F, merge = T)
which results in the Haplin file
test_pedToHaplin_result.txt
For more information, see the help file for pedToHaplin (in R, type ?pedToHaplin).
NOTE: pedToHaplin has not been
extensively tested, so you should always check the output against the
input!